00001 /* -*- Mode: C -*- 00002 * helix.h 00003 * Copyright © 2003 Laboratoire de Biologie Informatique et Théorique 00004 * Université de Montréal. 00005 * Author : Patrick Charbonneau 00006 * Created On : Wed Sep 12 16:48:15 2003 00007 * $Revision: 1.2 $ 00008 * $Id: helix.h,v 1.2 2003/10/18 00:18:46 larosem Exp $ 00009 * 00010 * This file is part of xmlcpg. 00011 * 00012 * xmlcpg is free software; you can redistribute it and/or modify it under 00013 * the terms of the GNU Lesser General Public License as published by the Free 00014 * Software Foundation; either version 2 of the License, or (at your option) 00015 * any later version. 00016 * 00017 * xmlcpg is distributed in the hope that it will be useful, but WITHOUT ANY 00018 * WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS 00019 * FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for 00020 * more details. 00021 * 00022 * You should have received a copy of the GNU Lesser General Public License 00023 * along with xmlcpg; if not, write to the Free Software Foundation, Inc., 00024 * 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 00025 */ 00026 00027 00028 #ifndef _rnaml_helix_h_ 00029 #define _rnaml_helix_h_ 00030 00031 #include "baseid5p.h" 00032 #include "baseid3p.h" 00033 #include "length.h" 00034 #include "object.h" 00035 #include "xmlcpg.h" 00036 00037 00038 00042 typedef struct rnamlHELIX rnamlHelix; 00043 00048 rnamlHelix* rnamlnewHelix (); 00049 00055 rnamlHelix* rnamlcloneHelix (const rnamlHelix *helix); 00056 00061 void rnamldeleteHelix (rnamlHelix *helix); 00062 00068 int rnamlisHelix (const rnamlObject *obj); 00069 00076 int rnamlequalsHelix (const rnamlHelix *left, const rnamlHelix *right); 00077 00084 const char* rnamlgetHelixId (const rnamlHelix *helix); 00085 00092 void rnamlsetHelixId (rnamlHelix *helix, const char *id); 00093 00100 rnamlBaseId5p* rnamlgetHelixBaseId5p (rnamlHelix *helix); 00101 00107 void rnamlsetHelixBaseId5p (rnamlHelix *helix, rnamlBaseId5p *baseId5p); 00108 00115 rnamlBaseId3p* rnamlgetHelixBaseId3p (rnamlHelix *helix); 00116 00122 void rnamlsetHelixBaseId3p (rnamlHelix *helix, rnamlBaseId3p *baseId3p); 00123 00129 rnamlLength* rnamlgetHelixLength (const rnamlHelix *helix); 00130 00136 void rnamlsetHelixLength (rnamlHelix *helix, rnamlLength *length); 00137 00144 xmlcpgObject* rnamltoXMLHelix (const rnamlHelix *helix); 00145 00146 #endif 00147