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Website operational, publication submitted
12/12/2007
The website (v2.0) is now officially operational and a paper about it has been submitted.
Valentin G.
Fixes
09/12/2007
Several spelling mistakes were corrected. The alignment algorithm does not return a score or a distance for structures which cannot be aligned. The menus were slightly modified.
Valentin G.
Translation update
29/09/2007
Site is now in version 2.0 beta. All pages should be translated by now unless we forgot something!
Valentin G.
Site 2.0 alpha
21/09/2007
The website is now running version 2.0 alpha. Only English documentation is missing.
Valentin G.
Week Update - version 1.999
10/09/2007
This update is about the alignment program and some user interface elements: sequences split and join costs can now be specified and results display includes similarity rates. From now, the site should be updated less often.
Valentin G.
Week Update - version 1.99
19/08/2007
This weeks also includes last week update (which wasn't done for vacation reason). Major new things are on structures and alignments rendering side and also on custom score scheme management.
Valentin G.
Week Update - version 1.98
05/08/2007
This week, several tools were updated and in particular secondary structure rendering tool.
Valentin G.
Week Update - version 1.97
29/07/2007
Several new tools are now available: similar structures search, stems/stem-loops search and distance matrix computation.
Valentin G.
Week Update - version 1.96
23/07/2007
Stems/stem-loops search is now available.
Valentin G.
Week Update - version 1.95
09/07/2007
Database issues have been fixed and all seem to be working again. The site has been updated at the same time: better computation tracking, better results display, search system is being improved. The structure rendering code is being rewritten and this function is not available for alignments.
Valentin G.
Week Update - version 1.85
17/06/2007
A small update this week (which hides however a lot of work): comparison results page now displays computation progression "in real time" (every 5 seconds) and also sorts structures. I also increased to 2000 the limit number of structure one can compare at once.
Valentin G.
Week Update
10/06/2007
Site is now running version 1.80! What's up? Several graphic improvements, improvements on structures comparison page (entries can be added dynamically) and support added for floating point scores.
Valentin G.
Version 1.75
02/06/2007
Update done.
Valentin G.
Site Important Update
02/06/2007
An important site update is going on and should be over soon. This update includes a lot of user interface improvements, some database modifications and a RSS feed was added to follow site develeoppment.
Valentin G.
Interface Update
20/05/2007
Interface update: RNA families can be selected for comparison; structure count limit for comparison increased; some minor graphic improvements.
Valentin G.
Update
21/02/2007
Small GUI update.
Valentin G.
Structures Rendering Issue
17/02/2007
Some configuration issue has been solved and structures rendering works again.
Valentin G.
DIRO Update
06/10/2006
After some configuration modifications on the servers of the DIRO, requiered updates for this site have been brought. Appologies for the late update.
Valentin G.
Structures Rendering
29/05/2006
Several UI improvments have been done: secondary structures can now be rendered, and RNA family or taxonomy can be browsed using tree-browsing.
Valentin G.
GUI update
22/05/2006
Some user interface improvment have been brought (structures selection from alphabetic browsing of RNA familly and species, colors by modules).
Valentin G.
News system
22/05/2006
New system added and users can now register to get soon informed about server updates.
Valentin G.
Comparison Tool and Update
15/05/2006
Improvments on database browsing tools and comparison tools now available.
Valentin G.
DB Update
04/05/2006
Some updates on the database...
Valentin G.
Official Server Setup
21/04/2006
Started to install the site on LBIT (DIRO) servers.
Valentin G.
RFam Import
06/03/2006
Importation of RFam database with success. You can now browse structures by ID. Some database access issue should be solved in the next days.
Valentin G.
Tools Update
10/08/2005
Modifications on tools page. Added rendering and convertion tools.
Valentin G.
Site Start
01/08/2005
Site startup.
Valentin G.

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