Database
Multiple Alignment
| IDs | Aligned Sequences |
|---|---|
| Consensus structure | 5'-.<<<<<.....<<<<..<<<<.......<<<<..................................................<<<............ ...............>>>>>>>...>>>>>>>>.....>>>>>-3' |
| RS001931 (Rana catesbeiana (bullfrog)) | 5'-GGUCAGCAACAGCUC-AGCGGUUACUUCUCGA-----CACGGAAUUGUAAUUCUG------------------------AAAACCUUUC-------- -------------GGGGUUCGAAACCCGCGGGCGCCACCUGAC-3' |
| RS001932 (Mus musculus (house mouse)) | 5'-GGCCAGCUUUAGCUC-AGCGGUUAC--UUCGACAGUGGUUCAGUUCAU-UACCAGCUAUUCGUAGCAGGUUCGAACAACACAACCAACCACUUACCU AACCCGUGAGUGUUUGGUUCGAGACCCGCGGGCGCUCCCUGGC-3' |
| RS001933 (Mus musculus (house mouse)) | 5'-GGCCAGCUUUAGCUG-AGCGGUUAC--UUUGACAGUGUUUCAGUUCAU-UACCAGCUAUUCGUAGCAGGUUCAAAUAACACAACCAACCACUUGCCU AACCCAUGAGUGUUUGGUUCGAGACCGGCGGGCGCUCCCUGGC-3' |
| RS001934 (Rattus norvegicus (Norway rat)) | 5'-GGCCAGCUUUAGCUC-AGCGGUUAC--UUCGACGUGCUCCAGUUUGAGCAGGCUAUGUAACGUGGUCGGUUCGAGCAACACAACCAGCCGCUUGCCU AUCUGGUGAGUGGUUGGUUCGAGACCCGCGGGCGCUCUCUGGC-3' |
| RS001935 (Homo sapiens (human)) | 5'-GGCUGGCUUUAGCUC-AGCGGUUAC--UUCGACAAUGCUUUCCAUGGUUAGGAAA------------------------CCAACCUCUC-------- ----------UGGGUGGUUUGAGACCCGUGGGCCCUCUCCAGU-3' |
| RS001936 (Homo sapiens (human)) | 5'-GGYCAGCUUYAGCUC-AGCGGUUAC--UUCGACAGUUCUUUAAUUG---AAACAA------------------------GCAACCUGUC-------- ----------UGGGUGGUUCGARACCCGCGGCCGCUMYCUGGC-3' |
| RS001937 (Homo sapiens (human)) | 5'-GGCUGGCUUUAGCUC-AGCGGUUAC--UUCGCGUGU-------------CAUCAA------------------------ACCACCUCUC-------- ----------UGGGUUGUUCGAGACCCGCGGGCGCUCUCCAGC-3' |
| RS001938 (Homo sapiens (human)) | 5'-GGUCGGAGUUAGCUCAAGCGGUUAC--CUCCUCAUGCC-----------GGACUU------------------------UCUAUCUGUCCAUCUCUG U---------GCUGGGGUUCGAGACCCGCGGGUGCUUACUGAC-3' |
| RS001939 (Homo sapiens (human)) | 5'-GGYCAGCWWYAGCUC-AGCGGUUAC--UUCGAGUAC-------------AUUGUA------------------------ACCACCUCUC-------- ----------UGGGUGGUUCGARACCCGCGGSCGCYMYCUGRC-3' |
| RS001940 (Homo sapiens (human)) | 5'-GGCUGGCUUUAGCUC-AGCGGUUAC--UUCGAGUAC-------------AUUGUA------------------------ACCACCUCUC-------- ----------UGGGUGGUUCGAGACCCGCGGGUGCUUUCCAGC-3' |
| RS001941 (Homo sapiens (human)) | 5'-GGCUGGCUUUAGCUC-AGCGGUUAC--UUCGACAGUUCUUUAAUUG---AAACAA------------------------GCAACCUGUC-------- ----------UGGGUUGUUCGAGACCCGCGGGCGCUCUCCAGU-3' |
References:
- Griffiths-Jones, S., Bateman, A., Marshall, M., Khanna, A., Eddy, S.R., RFam: an RNA family database, Nucleic Acids Research, 2003, 31, 1, 439-441.

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