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Database

Multiple Alignment

IDsAligned Sequences
Consensus structure

5'-.....................<<<<<<<<<<<<<<....>>>>>>>>>>.>>>>...-3'

 
RS004632 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAUUUAGCUAGCAGGUUCUUAC-----UCU------GUAGG-AGUUAUA-3'

RS004633 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAUUUGUCUAGCAGGUUAGUAC-----UCU------GUAGG-AGCCACA-3'

RS004634 (Xenopus laevis (African clawed frog))

5'-UCUUUUACUAUUUGUUUAGCAGGUUCUUAC-----UCU------GUAGG-AGCCACA-3'

RS004635 (Xenopus laevis (African clawed frog))

5'-UCUUUUACUAUUUGUCUAGCAGGUUCUUAC-----ACU------GUAGG-AGCCACA-3'

RS004636 (Xenopus laevis (African clawed frog))

5'-UCUUUUACUAUUUGUCUAGGAGGUUCUUAC-----UCU------GUAGG-AGCCACA-3'

RS004637 (Xenopus laevis (African clawed frog))

5'-UCUUUUACUAUUUGUCUAGCCGGUUUUUAC-----UCU------GUUGG-AGCCACA-3'

RS004638 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAGUUAGCAAGUAGGCUUUUAC-----UCU------GACAG-AAUCAUA-3'

RS004639 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAUUUGUUUAGCAGGUUCUUAC-----UGU------GUU-G-AGCCAAC-3'

RS004640 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAUUUAGCUAGCAGGUUCUUAC-----UCU------GACUG-AGUCAUA-3'

RS004641 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAUUUGUCUAGCAGGUUCUUAC-----UCU------GUAGG-AGCCACA-3'

RS004642 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAUUUGUGUAGCAGGUUCUUGC-----CAUU-----GUAGG-AGCCACC-3'

RS004643 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUACUAUUUGUCUAGUAGGUUCUUAC-----UCU------GUAGG-AGCCACA-3'

RS004644 (Xenopus borealis (Kenyan clawed frog))

5'-GCUUUUACUAUUUGUCUAGCAGGUUCUUAC-----UCU------GUAGG-AGCCACA-3'

RS004645 (Xenopus borealis (Kenyan clawed frog))

5'-UCUUUUGCUAUUUGUCUAGCAGGUUCUUAU-----UUU------GUAGG-AGCCAAA-3'

RS004646 (Mus musculus (house mouse))

5'-UCUUUUAGAAUUUGUCUAGCAGGUUUUCUGACU--UC----GGUCGGAA-AACGCCU-3'

RS004647 (Mus musculus (house mouse))

5'-UCUUUUAGAAUUUGUCUAGCAGGUUUUCUGACU--UC----GGUCGGAA-AACCCCY-3'

RS004648 (Mus musculus (house mouse))

5'-UCUUUUAGAAUUUGUCUAGCAGGUUUUCUGACU--UC----GGUCGGAA-AACCCCU-3'

RS004649 (Homo sapiens (human))

5'-UCUUUUAGAAUUUGUCUAGUAGGCUUUCUGGCU--UUUC--A-CCGGAA-AGCCCCU-3'

RS004650 (Psammechinus miliaris (sand urchin))

5'-UCUUUCA-AGUUUCUCUAGAAGGGUCUCGCGUCCGAAGUCGGAGGCGAGUGCCCAAC-3'

RS004651 (Psammechinus miliaris (sand urchin))

5'-UCUUUCA-AGUUUCUCUAGAAGGGUCUCGCUUCCGAAGUCGGAGGCGAGUGCCCAAC-3'

RS004652 (Psammechinus miliaris (sand urchin))

5'-UCUUUCA-AGUUUCUCUAGAAGGGUCUCGCUUCCGAAGUCGGAUGCGAGUGCCCAAC-3'

RS004653 (Psammechinus miliaris (sand urchin))

5'-UCUUUCA-AGUUUCUCUAGAAGGGUCUCGCGUCCGAAGUCGGAGGCGAGUGCCCAAC-3'

RS004654 (Psammechinus miliaris (sand urchin))

5'-UCUUUCA-AGUUUCUCUAGAAGGGUCUCGCAUCCGAAGUCGGAGGCGAGUGCCCAAU-3'

RS004655 (Psammechinus miliaris (sand urchin))

5'-UCUUUCA-AGUUUCUCUAGAAGAGUCUCGCUUCCGAAGUCGGAGGCGAGUGCCC----3'


References:

  1. Griffiths-Jones, S., Bateman, A., Marshall, M., Khanna, A., Eddy, S.R., RFam: an RNA family database, Nucleic Acids Research, 2003, 31, 1, 439-441.