Database
Multiple Alignment
| IDs | Aligned Sequences |
|---|---|
| Consensus structure | 5'-<<<<<............................................................................................ ...>>>>>-3' |
| RS003581 (Cryptosporidium parvum) | 5'-CUAUU-UAUGAUGAUUU-CCC----UUAAUUU-UACCAUCUUUCGGGUCUGAAUUAA-------------GAUGUGUUGAUAUUAUGGGAUAUACUG A--AAUAG-3' |
| RS003582 (Mus musculus (house mouse)) | 5'--AUCCUAGUGAUGACAAGACGAC-AUUGUCAA-C-CAAUCCCCCACAAGGGAAUGAG-------------GACAUG-------UCCUGCA-AUUCUG AAUGG----3' |
| RS003583 (Mus musculus (house mouse)) | 5'-GAUCCUAGUGAUGACAAGACGAC-AUUGUCAA-C-CAAUCCCCCACAAGGGAAUGAG-------------GACAUG-------UCCUGCA-AUUCUG AAUGGGUU-3' |
| RS003584 (Sus scrofa (pig)) | 5'-GAUCCUGGUGAUGACCA-AUGAC-AUUGUCAG-C-CAAUCC-CCACAUGGGAAUGUG-------------GACAUG-------UCCUGCA-AUUCUG AAGGGAUU-3' |
| RS003585 (Oryza sativa (japonica cultivar-group)) | 5'-UGGCC-GGUGAAGAAAA-CCUCG-AUUAAAAA-CACCAUCUUUCGGGGCUGAUCGGCCGCCGCUCGGCG-GCCAUGCUGCCA-UUCUGCA-AUUCUG A--GGCCA-3' |
| RS003586 (Oryza sativa (japonica cultivar-group)) | 5'-GGACC-UGUGAUGAAAU-CUGGA-ACCAAAAA-UACCAUCUUUCGGGACUGAUUUGGCUU---UCAGCA-GCCAUGUUGUCACUUCCAAG-AUCCUG A--GGUCU-3' |
| RS003587 (Oryza sativa (japonica cultivar-group)) | 5'-CGACG--GUGAUGAAAAACCGCA-AGAAAAACACACCAUCUUUCGGGGCUGAUUUGGCGCCGCCGCGCGUGCAAUGAUGCUAAUUCUGCA-AUUCUG A--UGUCC-3' |
| RS003588 (Arabidopsis thaliana (thale cress)) | 5'-UAGCC-AAUGAGGACAU-CAGAUUAUAAAAGAACACCAUCUUUCGGGACUGAUUAA---------------CAUUGAUGAUACUUCUGCA-AUUCUG A--GGCUA-3' |
| RS003589 (Arabidopsis thaliana (thale cress)) | 5'--AGCC-GAUGUGGAUAU-CAGAUUAUAAAAGAACACCAUCUUUCGGGACUGAUUGACUUCU--UUUGAA-GUUUUGCUGAUACUUCUGCA-AUUCUG A--GGCU--3' |
References:
- Griffiths-Jones, S., Bateman, A., Marshall, M., Khanna, A., Eddy, S.R., RFam: an RNA family database, Nucleic Acids Research, 2003, 31, 1, 439-441.

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