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Database

Multiple Alignment

IDsAligned Sequences
Consensus structure

5'-.....<<<<<.......<<<<.<<<<<.....>>>>>.......>>>>.>>>>>......................-3'

 
RS011470 (Danio rerio (zebrafish))

5'-CUUCAAAAGCAUUGCACCCAGAGUCUGGUCUGCAGACACUGAACCUGGAGCUUUGUUGUUUUUAUUAAAGCAUGUU-3'

RS011471 (Xenopus laevis (African clawed frog))

5'-UGUU-UCAGCAUUGCACCCAGAGUCUGCAACUCGGACAUUGUACCUGGAGCUUGUGUUGUUGUAAUAAACAUGAUU-3'

RS011472 (Mus musculus (house mouse))

5'-CUAC-ACAGAAUUCUAUCCAGAGUCUG-UCCAUAGGCUUUGCAUUUGGCAUUGU-AGGGUGUAUUUAAAGUGGUUU-3'

RS011473 (Mus musculus (house mouse))

5'-CCAC-ACAGCAUCGUACCCAGAGUCUG-UCCCCAGACAUUGCACCUGGUGCUGUUAGGUUGUGAUUAAAGUGAGUU-3'

RS011474 (Mus musculus (house mouse))

5'-CCAC-ACAGCAUUUUACCCAGAGUCUG-UCCCCAGACAUUGCACCUGGGGCUGUUAAAUUGUGAUUAAAGUGAGUU-3'

RS011475 (Mus musculus (house mouse))

5'-CCAC-ACAGCAUUGUACCCAGAGUCUG-UCCCCAGACAUUGCACCUGGCGCUGUUAGAUUGUGAUUAAAGUGAGUU-3'

RS011476 (Mus musculus (house mouse))

5'-CCAC-ACAGCAUUGUACCCAGAGUCUG-UCCCCAGAAAUUGCACCUGGCGCUGUUAGGUUGUGAUUAAAGUGAGUU-3'

RS011477 (Homo sapiens (human))

5'-CCAC-ACAGCAUUGUACCCAGAGUCUG-UCCCCAGACAUUGCACCUGGCGCUGUUAGGCCGGAAUUAAAGUGGCUU-3'


References:

  1. Griffiths-Jones, S., Bateman, A., Marshall, M., Khanna, A., Eddy, S.R., RFam: an RNA family database, Nucleic Acids Research, 2003, 31, 1, 439-441.