Database
Multiple Alignment
| IDs | Aligned Sequences |
|---|---|
| Consensus structure | 5'-.........<<<<<<<<<<<<<<<<<<<<<.<<............................................................>>.> >>>>>>>>>>>>>>>>>>>>.........-3' |
| RS011409 (Oryza sativa (japonica cultivar-group)) | 5'-GUGCUUGCAGGUGCAGCACCAUCAAGAUUCACA-----UCGAGUUCAUCCCUAAACGAGA-UCGAGGUUGGC------UGACU-AUAUGUGA-UGAG AAUCUUGAUGAUGCUGCAUCAGCAAACGC-3' |
| RS011410 (Oryza sativa (japonica cultivar-group)) | 5'-GUGUUUGCGGGCGUGGCAUCAUCAAGAUUCACA-----UC-CAUGCAUAUAUCACAAGAC-GCAC-----AUA----UACAUC-CGAUUUGGCUGAG AAUCUUGAUGAUGCUGCAUCCGCAGACAA-3' |
| RS011411 (Oryza sativa (japonica cultivar-group)) | 5'-CUUGUUGCGGGUGCAGCGUCAUCAAGAUUCAC-------G-UGUGCCGCACGGCACACG--UAUCGGUUUUCA----AGUGUAG-UCAUCGUGCGUG AAUCUUGAUGAUGCUGCACCAGCAAAGAG-3' |
| RS011412 (Arabidopsis thaliana (thale cress)) | 5'-UUGUUGGCUGCUGUGGCAUCAUCAAGAUUCACA-----UC-UGUUGAUGGACGGUGGUGAUUCACUCUCCACA----AAGUUCUCUAUGAAAAUGAG AAUCUUGAUGAUGCUGCAUCGGCAAUCAA-3' |
| RS011413 (Arabidopsis thaliana (thale cress)) | 5'-GUAGUCGCAGAUGCAGCACCAUUAAGAUUCACAAGAGAUG-UGGUUCCCUUUGCUUUCGCCUCUCGAUCCGCAGAAAAGGGUUCCUUAUCGAGUGGG AAUCUUGAUGAUGCUGCAUCAGCAAAUAC-3' |
| RS011414 (Arabidopsis thaliana (thale cress)) | 5'-UUGUUUGUAGGCGCAGCACCAUUAAGAUUCACA--------UGGAAAUUGAUAAAUACC---CUAAAUUAGG------GUUUUGAUAUGUAUAUGAG AAUCUUGAUGAUGCUGCAUCAACAAUCGA-3' |
| RS011415 (Arabidopsis thaliana (thale cress)) | 5'-UUGUUUGCUAUUGCAACAUCUUCAAGAUUCAGA-----AA-UCAGAUUCUCUUAUGGGU--UUUCUUUUGAGCC---UUUAUU--UUUUGGUUUGAG AAUCUUGAUGAUGCUGCAGCGGCAAUUAA-3' |
| RS011416 (Arabidopsis thaliana (thale cress)) | 5'-CUGUUCGCUGUUGGAGCAUCAUCAAGAUUCACAAAUCAUC-AAGUAUUCGUGUAAAUAA--ACCCAUUUAUGAUUAGAUUUUUGAUGUAUGUAUGAG AAUCUUGAUGAUGCUGCAGCUGCAAUCAG-3' |
References:
- Griffiths-Jones, S., Bateman, A., Marshall, M., Khanna, A., Eddy, S.R., RFam: an RNA family database, Nucleic Acids Research, 2003, 31, 1, 439-441.

RSS Feed