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Database

Multiple Alignment

IDsAligned Sequences
Consensus structure

5'-...<<<<..........................................................................................

......>>>>...-3'

 
RS008715 (Lotus japonicus)

5'-AGACGAACAUGAUGAAAGCAAAAAUUAAAAAGAAUGCGUGAUCAUCAAACAUUAUGUGUUUGAUAUGAUCG------AACUUGUCAUGCUACGUUCU

UUCUGAUUCGUCU-3'

RS008716 (Arabidopsis thaliana (thale cress))

5'-UGAAGAAUGUGAUGAAAG------UUGUCGAUUAUGUGUGAUGAU------UCUUUAGAUUCAAUUGAUCGAUAAAAACUUCAAUUCGCUACGUUCU

UUCUGAUUCUUCA-3'

RS008717 (Arabidopsis thaliana (thale cress))

5'-UGUAGAAUAUGAUGAAAG------UUGUA---UAUCGGUGAUGGU-------CUUUUGAUUCAUAUGAUCGACAAAAAUUUCAACUCGCUACGUUCU

UUCUGAUUCUUAC-3'

RS008718 (Arabidopsis thaliana (thale cress))

5'----AGAAUAUGAUGAAAG------UUGUA---UAUCGGUGAUGGU-------CUUUUGAUUCAUAUGAUCGACAAAAAUUUCAACUCGCUACGUUCU

UUCUGAUUCU----3'

RS008719 (Arabidopsis thaliana (thale cress))

5'-UGAAGAAUGUGAUGAAAG------UUGUCGAUUAUGUGUGAUGAU------UCUUUAGAUUCAAUUGAUCGAUAAAAACUUCAAUUCGCUACGUUCU

UUCUGAUUCUUCA-3'

RS008720 (Arabidopsis thaliana (thale cress))

5'----GGAAUAUGAUGAAAG------UUGUA---UAUCGGUGAUGGU-------CUUUUGAUUCAUAUGAUCGACAAAAAUUUCAACUCGCUACGUUCU

UUCUGAUUCUUUU-3'


References:

  1. Griffiths-Jones, S., Bateman, A., Marshall, M., Khanna, A., Eddy, S.R., RFam: an RNA family database, Nucleic Acids Research, 2003, 31, 1, 439-441.