Database
Multiple Alignment
| IDs | Aligned Sequences |
|---|---|
| Consensus structure | 5'-.................<<<<<<<<<.......>>>>>>>>>.................<<<.<<.......>>.>>>................... ...<<<.................................<<<<<....>>>>>.......>>>.......<<<<<<<<<<<<<..>>>>>>>>>>>>>.. ...........-3' |
| RS005250 (Escherichia coli) | 5'-ACGAUCGAUAUCUAUUUUAUCGAUCGUUUAUAUCGAUCGAUAAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUACGUA--CAGA-AAGACAU UCAGGGAACAACAGAACCACAAUUCAGAAACUCCCA-CAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACGUUUGUGGGUACCGGCUU UUUUAUUCACC-3' |
| RS005251 (Escherichia coli) | 5'-ACGAUCAAUAUCGAUUUAAUCGAUCGUUUAUAUCGAUCGAUUAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUAUGUUACCAGA-AAGACAU UCCGGGAACAACAGAACCACAAUUCAGAAAUUCCCA-CAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACGUUUGUGGGUACCGGCUU UUUUAUUCACC-3' |
| RS005252 (Escherichia coli CFT073) | 5'-ACGAUCGAUAACUAUUUAAUCGAUCGUUUAUAUCGAUCGUUAUGCUAAUAAUAACACCCGUUAGCAAUGUAUGCAGA--CACA--CAGACAUGAGAU UCAGGGAACAACAGAGCCACACGUCAGAAACUUCCAUCAGCCGGAUCUGCGGCACUGUAACCCUUCACCUGCAGGUAUCCACAUUUGUGGAUACCGGCUU UUU-AUUCACC-3' |
| RS005253 (Escherichia coli CFT073) | 5'-ACGAUCAAUACCUAUUUUACCGAUCGUUAAUAUCGAUCGUUAUGCUAAUAAUAACUCCUGUUAGCAACGUGCGCAGAUACACA--CAGACAUGAGAU UCAGGGAACAACAGAGCCACACGUCAGAAACUUCCGUCAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACAUCUGUGGAUACCGGCUU UUUUAUUCACC-3' |
| RS005254 (Escherichia coli W3110) | 5'-ACGAUCAAUAUCUAUUUUAUCGAUCGUUUAUAUCGAUCGAUAAGCUAAUAAUAACCUUUGUCAGUAACAUGCACAGAUACGUA--CAGA-AAGACAU UCAGGGAACAACAGAACCACAAUUCAGAAACUCCCA-CAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACGUUUGUGGGUACCGGCUU UUUUAUUCACC-3' |
| RS005255 (Escherichia coli) | 5'-ACGAUCGAUACCUAUUUCACCGAUCGUUAAUAUCGAUCGUUAUGCUAAUAAUAACUCAUGUUAGCAACGUGCGCAGAUACACA--CAGUCAUGAGAU UCAGGGAACAACAGAGCCACACGUCAGAAACUUCCGUCAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACAUCUGUGGAUACCGGCUU UUUUAUUCACC-3' |
| RS005256 (Shigella flexneri 2a) | 5'-ACGAUCGAUACCUAUUUUACCGAUCGUUAAUAUCGAUCGUUAUGCUAAUAAUAACUCCUGUUAGCAACGUGCGCAGAUACACA--CAGACAUGAGAU UCAGGGAACAACAGAGCCACACGUCAGAAACUUCCGUCAGCCGGACCUCCGGCACUGUAACCCUUUACCUGCCGGUAUCCACAUCUGUGGAUACCGGCUU UUUUAUUCACC-3' |
References:
- Griffiths-Jones, S., Bateman, A., Marshall, M., Khanna, A., Eddy, S.R., RFam: an RNA family database, Nucleic Acids Research, 2003, 31, 1, 439-441.

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