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Database

Browse by: RNA Families (tree)

root (15068)

Cis-reg (8596)

riboswitch (587)

Cobalamin (128) (RFam)


Secondary structures in selected family (ID, species, length):

RS005823, Corynebacterium diphtheriae (EMBL), 201 b (EMBL)

RS005824, Corynebacterium diphtheriae (EMBL), 201 b (EMBL)

RS005825, Mycobacterium leprae (EMBL), 213 b (EMBL)

RS005826, Mycobacterium leprae (EMBL), 181 b (EMBL)

RS005827, Mycobacterium avium subsp. paratuberculosis K-10 (EMBL), 242 b (EMBL)

RS005828, Mycobacterium avium subsp. paratuberculosis K-10 (EMBL), 181 b (EMBL)

RS005829, Mycobacterium tuberculosis H37Rv (EMBL), 183 b (EMBL)

RS005830, Mycobacterium bovis AF2122/97 (EMBL), 201 b (EMBL)

RS005831, Mycobacterium bovis AF2122/97 (EMBL), 183 b (EMBL)

RS005832, Propionibacterium freudenreichii subsp. shermanii (EMBL), 211 b (EMBL)

RS005833, Propionibacterium freudenreichii subsp. shermanii (EMBL), 245 b (EMBL)

RS005834, Streptomyces coelicolor (EMBL), 298 b (EMBL)

RS005835, Streptomyces coelicolor (EMBL), 190 b (EMBL)

RS005836, Streptomyces coelicolor (EMBL), 225 b (EMBL)

RS005837, Streptomyces coelicolor (EMBL), 188 b (EMBL)

RS005838, Streptomyces coelicolor (EMBL), 248 b (EMBL)

RS005839, Streptomyces griseus subsp. griseus (EMBL), 215 b (EMBL)

RS005840, Streptomyces coelicolor (EMBL), 215 b (EMBL)

RS005841, Streptomyces coelicolor (EMBL), 168 b (EMBL)

RS005842, Streptomyces microflavus (EMBL), 211 b (EMBL)

RS005843, Streptomyces coelicolor (EMBL), 184 b (EMBL)

RS005844, Bacteroides fragilis (EMBL), 223 b (EMBL)

RS005845, Bacteroides thetaiotaomicron VPI-5482 (EMBL), 193 b (EMBL)

RS005846, Bacteroides thetaiotaomicron VPI-5482 (EMBL), 207 b (EMBL)

RS005847, Bacteroides thetaiotaomicron VPI-5482 (EMBL), 207 b (EMBL)

RS005848, Bacteroides thetaiotaomicron VPI-5482 (EMBL), 188 b (EMBL)

RS005849, Bacteroides thetaiotaomicron VPI-5482 (EMBL), 214 b (EMBL)

RS005850, Bacteroides thetaiotaomicron VPI-5482 (EMBL), 206 b (EMBL)

RS005851, Porphyromonas gingivalis W83 (EMBL), 217 b (EMBL)

RS005852, Porphyromonas gingivalis W83 (EMBL), 181 b (EMBL)

RS005853, Porphyromonas gingivalis W83 (EMBL), 260 b (EMBL)

RS005854, Porphyromonas gingivalis W83 (EMBL), 204 b (EMBL)

RS005855, Porphyromonas gingivalis W83 (EMBL), 188 b (EMBL)

RS005856, Synechococcus sp. WH 8102 (EMBL), 220 b (EMBL)

RS005857, Bacillus megaterium (EMBL), 180 b (EMBL)

RS005858, Bacillus megaterium (EMBL), 180 b (EMBL)

RS005859, Bacillus phage phBC6A52 (EMBL), 189 b (EMBL)

RS005860, Bacillus cereus group.Viruses.Viruses.Viruses.Viruses, 189 b (EMBL)

RS005861, Bacillus cereus ATCC 10987 (EMBL), 189 b (EMBL)

RS005862, Listeria innocua (EMBL), 178 b (EMBL)

RS005863, Listeria monocytogenes (EMBL), 178 b (EMBL)

RS005864, Listeria monocytogenes (EMBL), 191 b (EMBL)

RS005865, Listeria innocua (EMBL), 192 b (EMBL)

RS005866, Clostridium tetani E88 (EMBL), 182 b (EMBL)

RS005867, Clostridium acetobutylicum ATCC 824 (EMBL), 188 b (EMBL)

RS005868, Clostridium tetani E88 (EMBL), 173 b (EMBL)

RS005869, Clostridium tetani E88 (EMBL), 178 b (EMBL)

RS005870, Clostridium tetani E88 (EMBL), 184 b (EMBL)

RS005871, Clostridium tetani E88 (EMBL), 189 b (EMBL)

RS005872, Clostridium acetobutylicum ATCC 824 (EMBL), 179 b (EMBL)

RS005873, Clostridium tetani E88 (EMBL), 183 b (EMBL)

RS005874, Clostridium tetani E88 (EMBL), 183 b (EMBL)

RS005875, Clostridium tetani E88 (EMBL), 182 b (EMBL)

RS005876, Clostridium tetani E88 (EMBL), 189 b (EMBL)

RS005877, Clostridium tetani E88 (EMBL), 178 b (EMBL)

RS005878, Clostridium tetani E88 (EMBL), 182 b (EMBL)

RS005879, Thermoanaerobacter tengcongensis MB4 (EMBL), 241 b (EMBL)

RS005880, Thermoanaerobacter tengcongensis MB4 (EMBL), 241 b (EMBL)

RS005881, Enterococcus faecalis V583 (EMBL), 172 b (EMBL)

RS005882, Rhodopirellula baltica SH 1 (EMBL), 235 b (EMBL)

RS005883, Rhodopirellula baltica SH 1 (EMBL), 240 b (EMBL)

RS005884, Caulobacter crescentus CB15 (EMBL), 229 b (EMBL)

RS005885, Caulobacter crescentus CB15 (EMBL), 190 b (EMBL)

RS005886, Bradyrhizobium japonicum (EMBL), 202 b (EMBL)

RS005887, Rhodopseudomonas palustris CGA009 (EMBL), 205 b (EMBL)

RS005888, Rhodopseudomonas palustris CGA009 (EMBL), 199 b (EMBL)

RS005889, Rhodopseudomonas palustris CGA009 (EMBL), 204 b (EMBL)

RS005890, Rhodopseudomonas palustris CGA009 (EMBL), 202 b (EMBL)

RS005891, Rhodopseudomonas palustris CGA009 (EMBL), 201 b (EMBL)

RS005892, Rhodopseudomonas palustris CGA009 (EMBL), 216 b (EMBL)

RS005893, Rhodopseudomonas palustris CGA009 (EMBL), 197 b (EMBL)

RS005894, Rhodopseudomonas palustris CGA009 (EMBL), 212 b (EMBL)

RS005895, Rhodopseudomonas palustris CGA009 (EMBL), 197 b (EMBL)

RS005896, Brucella melitensis 16M (EMBL), 214 b (EMBL)

RS005897, Mesorhizobium loti (EMBL), 201 b (EMBL)

RS005898, Agrobacterium vitis (EMBL), 215 b (EMBL)

RS005899, Agrobacterium tumefaciens str. C58 (EMBL), 184 b (EMBL)

RS005900, Agrobacterium tumefaciens str. C58 (EMBL), 236 b (EMBL)

RS005901, Agrobacterium tumefaciens str. C58 (EMBL), 225 b (EMBL)

RS005902, Agrobacterium tumefaciens str. C58 (EMBL), 210 b (EMBL)

RS005903, Agrobacterium tumefaciens str. C58 (EMBL), 218 b (EMBL)

RS005904, Agrobacterium tumefaciens str. C58 (EMBL), 229 b (EMBL)

RS005905, Sinorhizobium meliloti (EMBL), 204 b (EMBL)

RS005906, Sinorhizobium meliloti (EMBL), 416 b (EMBL)

RS005907, Sinorhizobium meliloti (EMBL), 214 b (EMBL)

RS005908, Rhodobacter capsulatus (EMBL), 224 b (EMBL)

RS005909, Rhodobacter capsulatus (EMBL), 224 b (EMBL)

RS005910, Rhodobacter capsulatus (EMBL), 218 b (EMBL)

RS005911, Zymomonas mobilis (EMBL), 179 b (EMBL)

RS005912, Zymomonas mobilis (EMBL), 202 b (EMBL)

RS005913, Ralstonia solanacearum (EMBL), 180 b (EMBL)

RS005914, Ralstonia solanacearum (EMBL), 257 b (EMBL)

RS005915, Chromobacterium violaceum ATCC 12472 (EMBL), 186 b (EMBL)

RS005916, Chromobacterium violaceum ATCC 12472 (EMBL), 266 b (EMBL)

RS005917, Nitrosomonas europaea ATCC 19718 (EMBL), 228 b (EMBL)

RS005918, Shewanella oneidensis MR-1 (EMBL), 223 b (EMBL)

RS005919, Shewanella oneidensis MR-1 (EMBL), 231 b (EMBL)

RS005920, Escherichia coli (EMBL), 192 b (EMBL)

RS005921, Escherichia coli CFT073 (EMBL), 191 b (EMBL)

RS005922, Escherichia coli (EMBL), 189 b (EMBL)

RS005923, Photorhabdus luminescens subsp. laumondii TTO1 (EMBL), 168 b (EMBL)

RS005924, Salmonella typhimurium (EMBL), 193 b (EMBL)

RS005925, Salmonella typhimurium (EMBL), 176 b (EMBL)

RS005926, Salmonella typhimurium (EMBL), 194 b (EMBL)

RS005927, Salmonella enterica subsp. enterica serovar Typhi, 194 b (EMBL)

RS005928, Salmonella typhimurium LT2 (EMBL), 194 b (EMBL)

RS005929, Shigella flexneri 2a str. 2457T (EMBL), 191 b (EMBL)

RS005930, Yersinia pestis CO92 (EMBL), 261 b (EMBL)

RS005931, Acinetobacter calcoaceticus (EMBL), 211 b (EMBL)

RS005932, Pseudomonas aeruginosa PAO1 (EMBL), 206 b (EMBL)

RS005933, Pseudomonas putida KT2440 (EMBL), 199 b (EMBL)

RS005934, Pseudomonas aeruginosa PAO1 (EMBL), 192 b (EMBL)

RS005935, Pseudomonas putida KT2440 (EMBL), 209 b (EMBL)

RS005936, Pseudomonas putida KT2440 (EMBL), 207 b (EMBL)

RS005937, Pseudomonas putida KT2440 (EMBL), 224 b (EMBL)

RS005938, Pseudomonas aeruginosa PAO1 (EMBL), 197 b (EMBL)

RS005939, Pseudomonas aeruginosa PAO1 (EMBL), 206 b (EMBL)

RS005940, Pseudomonas putida KT2440 (EMBL), 222 b (EMBL)

RS005941, Vibrio vulnificus CMCP6 (EMBL), 199 b (EMBL)

RS005942, Vibrio cholerae O1 biovar eltor str. N16961 (EMBL), 204 b (EMBL)

RS005943, Xanthomonas campestris pv. campestris str. ATCC 33913 (EMBL), 224 b (EMBL)

RS005944, Leptospira interrogans serovar Lai str. 56601 (EMBL), 181 b (EMBL)

RS005945, Leptospira interrogans serovar Lai str. 56601 (EMBL), 178 b (EMBL)

RS005946, Treponema denticola ATCC 35405 (EMBL), 182 b (EMBL)

RS005947, Treponema denticola ATCC 35405 (EMBL), 188 b (EMBL)

RS005948, Treponema denticola ATCC 35405 (EMBL), 205 b (EMBL)

RS005949, Oryza sativa (japonica cultivar-group) (EMBL), 238 b (EMBL)

RS005950, Stealth virus 1 (EMBL), 224 b (EMBL)