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baseid.h

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00001 /*                               -*- Mode: C -*- 
00002  * baseid.h
00003  * Copyright © 2002-03 Laboratoire de Biologie Informatique et Théorique
00004  *                     Université de Montréal.
00005  * Author           : Patrick Charbonneau
00006  * Created On       : Wed Sep 12 16:48:15 2003
00007  * $Revision: 1.3 $
00008  * $Id: baseid.h,v 1.3 2003/10/01 13:07:00 larosem Exp $
00009  *
00010  * This file is part of xmlcpg.
00011  *
00012  * xmlcpg is free software; you can redistribute it and/or modify it under
00013  * the terms of the GNU Lesser General Public License as published by the Free
00014  * Software Foundation; either version 2 of the License, or (at your option)
00015  * any later version.
00016  *
00017  * xmlcpg is distributed in the hope that it will be useful, but WITHOUT ANY
00018  * WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
00019  * FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for
00020  * more details.
00021  *
00022  * You should have received a copy of the GNU Lesser General Public License
00023  * along with xmlcpg; if not, write to the Free Software Foundation, Inc.,
00024  * 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
00025  */
00026 
00027 
00028 #ifndef _rnaml_baseid_h_
00029 #define _rnaml_baseid_h_
00030 
00031 #include "moleculeid.h"
00032 #include "modelid.h"
00033 #include "object.h"
00034 #include "xmlcpg.h"
00035 
00036 
00037 
00041 typedef struct rnamlBASEID rnamlBaseId;
00042 
00047 rnamlBaseId* rnamlnewBaseId ();
00048 
00054 rnamlBaseId* rnamlcloneBaseId (const rnamlBaseId *baseid);
00055 
00060 void rnamldeleteBaseId (rnamlBaseId *baseid);
00061 
00067 int rnamlisBaseId (const rnamlObject *obj);
00068 
00075 int rnamlequalsBaseId (const rnamlBaseId *left, const rnamlBaseId *right);
00076 
00083 rnamlMoleculeId* rnamlgetBaseIdMoleculeId (rnamlBaseId *baseId);
00084 
00090 void rnamlsetBaseIdMoleculeId (rnamlBaseId *baseId, rnamlMoleculeId *moleculeId);
00091 
00098 rnamlModelId* rnamlgetBaseIdModelId (rnamlBaseId *baseId);
00099 
00105 void rnamlsetBaseIdModelId (rnamlBaseId *baseId, rnamlModelId *modelId);
00106 
00112 const char* rnamlgetBaseIdStrand (const rnamlBaseId *baseId);
00113 
00120 void rnamlsetBaseIdStrand (rnamlBaseId *baseId, const char *strand);
00121 
00127 int rnamlgetBaseIdPosition (const rnamlBaseId *baseId);
00128 
00134 void rnamlsetBaseIdPosition (rnamlBaseId *baseId, int position);
00135 
00142 xmlcpgObject* rnamltoXMLBaseId (const rnamlBaseId *baseId);
00143 
00144 #endif
00145 

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