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baseconformation.h

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00001 /*                               -*- Mode: C -*- 
00002  * baseconformation.h
00003  * Copyright © 2003 Laboratoire de Biologie Informatique et Théorique
00004  *                  Université de Montréal.
00005  * Author           : Patrick Charbonneau
00006  * Created On       : Wed Sep 12 16:48:15 2003
00007  * $Revision: 1.1 $
00008  * $Id: baseconformation.h,v 1.1 2003/10/01 13:06:53 larosem Exp $
00009  *
00010  * This file is part of xmlcpg.
00011  *
00012  * xmlcpg is free software; you can redistribute it and/or modify it under
00013  * the terms of the GNU Lesser General Public License as published by the Free
00014  * Software Foundation; either version 2 of the License, or (at your option)
00015  * any later version.
00016  *
00017  * xmlcpg is distributed in the hope that it will be useful, but WITHOUT ANY
00018  * WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
00019  * FOR A PARTICULAR PURPOSE.  See the GNU Lesser General Public License for
00020  * more details.
00021  *
00022  * You should have received a copy of the GNU Lesser General Public License
00023  * along with xmlcpg; if not, write to the Free Software Foundation, Inc.,
00024  * 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
00025  */
00026 
00027 
00028 #ifndef _rnaml_baseconformation_h_
00029 #define _rnaml_baseconformation_h_
00030 
00031 #include "baseid.h"
00032 #include "basetorsionangles.h"
00033 #include "object.h"
00034 #include "xmlcpg.h"
00035 
00036 
00037 
00041 typedef struct rnamlBASECONFORMATION rnamlBaseConformation;
00042 
00047 rnamlBaseConformation* rnamlnewBaseConformation ();
00048 
00054 rnamlBaseConformation* rnamlcloneBaseConformation (const rnamlBaseConformation *baseconformation);
00055 
00060 void rnamldeleteBaseConformation (rnamlBaseConformation *baseconformation);
00061 
00067 int rnamlisBaseConformation (const rnamlObject *obj);
00068 
00075 int rnamlequalsBaseConformation (const rnamlBaseConformation *left, const rnamlBaseConformation *right);
00076 
00083 rnamlBaseId* rnamlgetBaseConformationBaseId (rnamlBaseConformation *baseConformation);
00084 
00090 void rnamlsetBaseConformationBaseId (rnamlBaseConformation *baseConformation, rnamlBaseId *baseId);
00091 
00097 const char* rnamlgetBaseConformationPucker (const rnamlBaseConformation *baseConformation);
00098 
00105 void rnamlsetBaseConformationPucker (rnamlBaseConformation *baseConformation, const char *pucker);
00106 
00112 const char* rnamlgetBaseConformationGlycosyl (const rnamlBaseConformation *baseConformation);
00113 
00120 void rnamlsetBaseConformationGlycosyl (rnamlBaseConformation *baseConformation, const char *glycosyl);
00121 
00128 rnamlBaseTorsionAngles* rnamlgetBaseConformationBaseTorsionAngles (rnamlBaseConformation *baseConformation);
00129 
00135 void rnamlsetBaseConformationBaseTorsionAngles (rnamlBaseConformation *baseConformation, rnamlBaseTorsionAngles *baseTorsionAngles);
00136 
00143 xmlcpgObject* rnamltoXMLBaseConformation (const rnamlBaseConformation *baseConformation);
00144 
00145 #endif
00146 

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