00001 /* -*- Mode: C++ -*- 00002 * Segment.h 00003 * Copyright © 2003 Laboratoire de Biologie Informatique et Théorique 00004 * Université de Montréal. 00005 * Author : Patrick Charbonneau 00006 * Created On : Wed Sep 12 16:48:15 2003 00007 * $Revision: 1.2 $ 00008 * $Id: Segment.h,v 1.2 2003/10/18 00:25:04 larosem Exp $ 00009 * 00010 * This file is part of xmlcpg. 00011 * 00012 * xmlcpg is free software; you can redistribute it and/or modify it under 00013 * the terms of the GNU Lesser General Public License as published by the Free 00014 * Software Foundation; either version 2 of the License, or (at your option) 00015 * any later version. 00016 * 00017 * xmlcpg is distributed in the hope that it will be useful, but WITHOUT ANY 00018 * WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS 00019 * FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for 00020 * more details. 00021 * 00022 * You should have received a copy of the GNU Lesser General Public License 00023 * along with xmlcpg; if not, write to the Free Software Foundation, Inc., 00024 * 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 00025 */ 00026 00027 00028 #ifndef _rnaml_Segment_h_ 00029 #define _rnaml_Segment_h_ 00030 00031 extern "C" { 00032 #include "object.h" 00033 #include "segment.h" 00034 } 00035 00036 #include "Object.h" 00037 00038 00039 00040 namespace rnaml 00041 { 00042 class BaseId5p; 00043 00044 00045 00046 class Segment : public Object 00047 { 00048 00049 public: 00050 00051 // LIFECYCLE ------------------------------------------------------------ 00052 00056 Segment () : Object ((rnamlObject*) rnamlnewSegment ()) { } 00057 00062 Segment (const Segment &right) : Object (right) { } 00063 00068 Segment* clone () const { return new Segment (*this); } 00069 00073 virtual ~Segment () { } 00074 00075 // OPERATORS ------------------------------------------------------------ 00076 00082 Segment& operator= (const Segment &right); 00083 00084 // ACCESS --------------------------------------------------------------- 00085 00090 const char* getSegName () const { return rnamlgetSegmentSegName ((const rnamlSegment*) getCStructure ()); } 00091 00096 void setSegName (const char *segName) { rnamlsetSegmentSegName ((rnamlSegment*) getCStructure (), segName); } 00097 00102 BaseId5p* getBaseId5p () const; 00103 00108 void setBaseId5p (BaseId5p *baseId5p); 00109 00114 Object* getEnd () const; 00115 00120 void setEnd (Object *obj); 00121 00122 // METHODS -------------------------------------------------------------- 00123 00124 // I/O ----------------------------------------------------------------- 00125 00126 }; 00127 } 00128 00129 #endif