00001 /* -*- Mode: C++ -*- 00002 * MoleculeClass.h 00003 * Copyright © 2003 Laboratoire de Biologie Informatique et Théorique 00004 * Université de Montréal. 00005 * Author : Patrick Charbonneau 00006 * Created On : Wed Sep 12 16:48:15 2003 00007 * $Revision: 1.2 $ 00008 * $Id: MoleculeClass.h,v 1.2 2003/10/18 00:23:30 larosem Exp $ 00009 * 00010 * This file is part of xmlcpg. 00011 * 00012 * xmlcpg is free software; you can redistribute it and/or modify it under 00013 * the terms of the GNU Lesser General Public License as published by the Free 00014 * Software Foundation; either version 2 of the License, or (at your option) 00015 * any later version. 00016 * 00017 * xmlcpg is distributed in the hope that it will be useful, but WITHOUT ANY 00018 * WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS 00019 * FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for 00020 * more details. 00021 * 00022 * You should have received a copy of the GNU Lesser General Public License 00023 * along with xmlcpg; if not, write to the Free Software Foundation, Inc., 00024 * 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA 00025 */ 00026 00027 00028 #ifndef _rnaml_MoleculeClass_h_ 00029 #define _rnaml_MoleculeClass_h_ 00030 00031 #include <vector> 00032 00033 extern "C" { 00034 #include "moleculeclass.h" 00035 #include "object.h" 00036 } 00037 00038 #include "Object.h" 00039 00040 00041 00042 namespace rnaml 00043 { 00044 class Identity; 00045 00046 00047 00048 class MoleculeClass : public Object 00049 { 00053 std::vector< Object* > children; 00054 00055 public: 00056 00057 // LIFECYCLE ------------------------------------------------------------ 00058 00062 MoleculeClass () : Object ((rnamlObject*) rnamlnewMoleculeClass ()) { } 00063 00068 MoleculeClass (const MoleculeClass &right); 00069 00074 MoleculeClass* clone () const { return new MoleculeClass (*this); } 00075 00079 virtual ~MoleculeClass (); 00080 00081 // OPERATORS ------------------------------------------------------------ 00082 00088 MoleculeClass& operator= (const MoleculeClass &right); 00089 00090 // ACCESS --------------------------------------------------------------- 00091 00096 Identity* getIdentity () const; 00097 00102 void setIdentity (Identity *identity); 00103 00108 std::vector< Object* >& getChildren () { return children; } 00109 00114 void addChild (Object *obj); 00115 00120 virtual void setCStructure (rnamlObject *obj); 00121 00122 // METHODS -------------------------------------------------------------- 00123 00124 // I/O ----------------------------------------------------------------- 00125 00126 }; 00127 } 00128 00129 #endif